CESSHIV-1 database

General information on HIV-1 isolate

# 350

Accession number	AY314045
Name	WC10P-2
Subtype	B
Country	Canada
Sampling year	1996
Patient	WC10

AY314045 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgaggg gcggcgactg gtgagtacgc caaag-ttttg actagcggag gctagaagga gaga

Isolates with identical sequences of region:

AY314047(#352) AY314049(#354) AY314050(#355) AY314053(#358)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy