CESSHIV-1 database

General information on HIV-1 isolate

# 365

Accession number	AY314060
Name	WC10C-9
Subtype	B
Country	Canada
Sampling year	1996
Patient	WC10

AY314060 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgaggg gcggcgactg gtgagtacgc caaaa-ttttg actagcggag gctagaaggg gaga

Isolates with identical sequences of region:

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy