CESSHIV-1 database

General information on HIV-1 isolate

# 1133

Accession number	AY455784
Name	94BR-RJ-59
Subtype	BF
Country	Brazil
Sampling year	1994
Patient	BR59

AY455784 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cacacrgcaa gaggcgagag -cggcgactgg tgagtacgcc aaa--ttttgac tagcagaggc tagaaggaga ga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy