CESSHIV-1 database

General information on HIV-1 isolate

# 401

Accession number	AY455785
Name	94UFRJ-58
Subtype	BF
Country	Brazil
Sampling year	1994
Patient	BR58

AY455785 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaaggt gcacacggca agaggcgaga g-cggcgactg gtgagtacgc caaa--ttttga ctagcagagg ctagaaggag aga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy