CESSHIV-1 database

General information on HIV-1 isolate

# 3256

Accession number	AY456309
Name	HDC229
Subtype	GH
Country	Angola
Sampling year	2001
Patient	HDC229

AY456309 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaggtg cacacagcaa gaggcgagag -cggggacngg tgagtacgcc aaa--ttttgac tagcggaggc tagaaggaga ga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy