CESSHIV-1 database

General information on HIV-1 isolate

# 3261

Accession number	AY456311
Name	LFA11
Subtype	A1GU
Country	Angola
Sampling year	2001
Patient	LFA11

AY456311 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cgcacggcaa gaggcgaggg gaggcgactg gtgagtacgc caaaaatttt ttgactagcg gaggctagaa ggagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy