CESSHIV-1 database

General information on HIV-1 isolate

# 3226

Accession number	AY456313
Name	SNS23
Subtype	A1
Country	Angola
Sampling year	2001
Patient	SNS23

AY456313 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

gagactcggc ttgctgagag tgcacacagc aagaggcgag ag-cggcgacc ggtgagtacg ccatt--ttttg actagcggag gctagaagga gaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy