CESSHIV-1 database

General information on HIV-1 isolate

# 3227

Accession number	AY456314
Name	HJM06
Subtype	A1
Country	Angola
Sampling year	2001
Patient	HJM06

AY456314 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgagagt gcacacaaac aagaggcgag ag-cggggact ggtgagtacg ccatattttt tgactagcgg aagctaagaa ggaaaaa

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy