CESSHIV-1 database

General information on HIV-1 isolate

# 3230

Accession number	AY456317
Name	SNS04
Subtype	A1
Country	Angola
Sampling year	2001
Patient	SNS04

AY456317 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaggtg cacacagcaa gaggcgagag -cggggactgg tgagtacgcc tgaaattttt gactagcaga ggctagaagg agaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy