CESSHIV-1 database

General information on HIV-1 isolate

# 3231

Accession number	AY456318
Name	SNS03
Subtype	C
Country	Angola
Sampling year	2001
Patient	SNS03

AY456318 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cactcggcaa gaggcgaggg gcggcggctg gtgagtacgc caaattttat ttgactagcg gaggctagaa ggagaga

Isolates with identical sequences of region:

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy