CESSHIV-1 database

General information on HIV-1 isolate

# 3516

Accession number	AY456328
Name	SNS01
Subtype	GH
Country	Angola
Sampling year	2001
Patient	SNS01

AY456328 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgaggg -cggcgactgg tgagtacgcc aaaaattttg actagcggag gctagaagga gaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy