CESSHIV-1 database

General information on HIV-1 isolate

# 3527

Accession number	AY508136
Name	7_E6
Subtype	B
Country	USA
Submitted to NCBI	2003

AY508136 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacagcaa gaggcgaggg gcggcgactg gtgagtacgc cgaaa-tttcg actagcggag gctagaagga gaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy