CESSHIV-1 database

General information on HIV-1 isolate

# 3533

Accession number	AY508142
Name	7_H9
Subtype	B
Country	USA
Submitted to NCBI	2003

AY508142 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacagcaa gaggcgaggg gcggcgactg gtgagtacgc cgaaa-ttttg actagcggag gctagaaggt gaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy