CESSHIV-1 database

General information on HIV-1 isolate

# 3539

Accession number	AY508148
Name	8_C1
Subtype	B
Country	USA
Submitted to NCBI	2003

AY508148 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacagcaa gaggcgagag gcggcgactg gtgagtacgc cgaaa-ttttg actagcggag gctagaagga gaga

Isolates with identical sequences of region:

AY508130(#3521)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy