CESSHIV-1 database

General information on HIV-1 isolate

# 385

Accession number	AY532635
Name	02CM-DJO0131
Subtype	Group N
Country	Cameroon
Sampling year	2002
Patient	131

AY532635 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct cgttg--gtgca cacagcgaga ggcgaggcgg cggaagtg-tg agtacgca----at tttgactggc ggtggccaga aagcaggaga ga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy