CESSHIV-1 database

General information on HIV-1 isolate

# 3197

Accession number	AY676587
Name	HDC234
Subtype	H
Country	Angola
Sampling year	2001
Patient	HDC234

AY676587 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cacacagcaa gaggcgaggg gcgacgtgac tggtgagtac gtcatttttt tttgactagc ggaggctaga aggagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy