CESSHIV-1 database

General information on HIV-1 isolate

# 3437

Accession number	AY676591
Name	HDC235
Subtype	A1
Country	Angola
Sampling year	2001
Patient	HDC235

AY676591 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaggtg cacgcagcaa gaggcgagag -cggcgactgg tgagtacgcc aat--ttttgac tagcggaggc tagaaggaga ga

Isolates with identical sequences of region:

AB286855(#945) AB286856(#946)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy