CESSHIV-1 database

General information on HIV-1 isolate

# 3440

Accession number	AY676594
Name	LFA19
Subtype	A1
Country	Angola
Sampling year	2001
Patient	LFA19

AY676594 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaggtg cacacagcaa gaggcgaggg -cggcgactgg tgagtacgcc tgaaattttt gactagcaga ggctaggaag gggaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy