CESSHIV-1 database

General information on HIV-1 isolate

# 1621

Accession number	AY857024
Name	3010718
Subtype	CRF06_cpx
Country	Australia
Submitted to NCBI	2004
Patient	3010718

AY857024 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaggtg cacacagcaa gaggcgagag -cggcgactgg tgagtacgcc acaaaacttg ttgactagca gaggctagaa ggagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy