CESSHIV-1 database

General information on HIV-1 isolate

# 1660

Accession number	AY857175
Name	9420758
Subtype	CRF01_AE
Country	Australia
Submitted to NCBI	2004
Patient	9420758

AY857175 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaggtg cacacagcga gaggcgagag -cggcgactgg tgagtacgcc aaa--ttttgac tagcggaggc tagaaggaga ga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy