CESSHIV-1 database

General information on HIV-1 isolate

# 577

Accession number	DQ085873
Name	BREPM12609
Subtype	CRF28_BF
Country	Brazil
Sampling year	1999
Patient	12609

DQ085873 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgaggg gcggcgactg gtgagtacgc caaa--ttttga ctagcggagg ctagaaggag aga

Isolates with identical sequences of region:

AB480693(#2718) EF637053(#991)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy