CESSHIV-1 database

General information on HIV-1 isolate

# 746

Accession number	DQ358806
Name	02BR005
Subtype	BF1
Country	Brazil
Sampling year	2002
Patient	BR005

DQ358806 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaaacg cgcgcggcaa gaggcgaggg gcggcgactg gtgagtacgc caaatttttt gactagcgga ggctagaagg agaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy