CESSHIV-1 database

General information on HIV-1 isolate

# 748

Accession number	DQ358808
Name	02BR008
Subtype	B
Country	Brazil
Sampling year	2002
Patient	BR008

DQ358808 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacagcaa gaggcgaggg gcggcgactg gtgagtacgc catt--ttttga ctagcggagg ctagaaggag aga

Isolates with identical sequences of region:

AB253430(#913) AB253431(#848) DQ990880(#977)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy