CESSHIV-1 database

General information on HIV-1 isolate

# 645

Accession number	DQ369979
Name	03ZAPS034MB1
Subtype	C
Country	South Africa
Sampling year	2003
Patient	034MB

DQ369979 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cactcggcaa gaggcgagag -cggcggctgg tgagtacgcc gaattttatt tgactagcgg aggctagaag gagaga

Isolates with identical sequences of region:

AM076858(#1560)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy