CESSHIV-1 database

General information on HIV-1 isolate

# 652

Accession number	DQ369986
Name	03ZAPS049MB1
Subtype	C
Country	South Africa
Sampling year	2003
Patient	049MB

DQ369986 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cactcggcaa gaggcgaggg ggcggcgact ggtgagtacg ccaattttta tttgactagc agaggctaga aggagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy