CESSHIV-1 database

General information on HIV-1 isolate

# 979

Accession number	DQ979024
Name	X1670
Subtype	F1
Country	Spain (Romania)
Submitted to NCBI	2006
Patient	X1670

DQ979024 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacagcaa gaggcgagag -cggcgactgg tgagtacgcc aat--ttttgac tagcggaggc tagaaggaga ga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy