CESSHIV-1 database

General information on HIV-1 isolate

# 953

Accession number	EF091932
Name	110PA
Subtype	CRF31_BC
Country	Brazil
Sampling year	2002
Patient	PA110

EF091932 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cactcggcaa gaggcgagag -cggcggctgg tgagtacgcc attttatttg actagcggag gctagaagga gaga

Isolates with identical sequences of region:

EU293448(#1208)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy