CESSHIV-1 database

General information on HIV-1 isolate

# 1384

Accession number	EF121265
Name	patient_2082
Subtype	A
Country	Russia
Submitted to NCBI	2006
Patient	(patient 2082)

EF121265 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggacttggct tgctgaggtg cacacagcaa gaggcgagag -cggcgactgg tgagtacgcc taattatttt tgactagcgg aggctagaag gagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy