CESSHIV-1 database

General information on HIV-1 isolate

# 1385

Accession number	EF121268
Name	patient_2340
Subtype	A
Country	Russia
Submitted to NCBI	2006
Patient	(patient 2340)

EF121268 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaggtg cacacagcaa gaggcgagag -cggcgactgg tgagtacgcc taaagatttt gactagcgga ggctagaagg agaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy