CESSHIV-1 database

General information on HIV-1 isolate

# 1447

Accession number	EF178312
Name	MS2004_37_014
Subtype	B
Country	Australia
Sampling year	2004
Patient	- (6860793)

EF178312 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacagcaa gaggcgaggg gcagcgactg gtgagtacgc tgaaaatttt tgactagcgg aggctagaag gagaga

Isolates with identical sequences of region:

AY857107(#1448)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy