CESSHIV-1 database

General information on HIV-1 isolate

# 1671

Accession number	EF178332
Name	MS2004_37_034
Subtype	B
Country	Australia
Sampling year	2004
Patient	- (1160428)

EF178332 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

gaactcggct tgctgaagcg cgcacagcaa gaggcgaggg gcggcgactg gtgagtacgc caaaa-ttttg actagcggag gctagaagga gaga

Isolates with identical sequences of region:

AY856985(#1603)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy