CESSHIV-1 database

General information on HIV-1 isolate

# 1674

Accession number	EF178339
Name	MS2004_37_041
Subtype	B
Country	Australia
Sampling year	2004
Patient	- (7645574)

EF178339 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcrcagcaa gaggcgaggg gcggcgactg gtgagtacgc caaaattttt gactagcgga ggctagaagg agaga

Isolates with identical sequences of region:

AY857123(#1649)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy