CESSHIV-1 database

General information on HIV-1 isolate

# 1675

Accession number	EF178342
Name	MS2004_37_044
Subtype	B
Country	Australia
Sampling year	2004

EF178342 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacagcaa gaggcgaggg gcggcgactg gtgagtacgc cgaaaaattt tgactagcgg agactagaag aaaaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy