CESSHIV-1 database

General information on HIV-1 isolate

# 1682

Accession number	EF178359
Name	MS2004_37_061
Subtype	B
Country	Australia
Sampling year	2004
Patient	- (480355)

EF178359 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcgcagcaa gaggcgaggg gcggcgactg gtgagtacgc caaaaaattt tttgactagc ggaggctaga aggagaga

Isolates with identical sequences of region:

AY856970(#1599)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy