CESSHIV-1 database

General information on HIV-1 isolate

# 1683

Accession number	EF178362
Name	MS2004_37_064
Subtype	B
Country	Australia
Sampling year	2004
Patient	- (830534)

EF178362 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcgcggcaa gaggcgaggg gcggcgaccg gtgagtacgc cat---ttttgac tagcggaggc tagaaggaga ga

Isolates with identical sequences of region:

AY856980(#1601)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy