CESSHIV-1 database

General information on HIV-1 isolate

# 1684

Accession number	EF178367
Name	MS2004_37_069
Subtype	B
Country	Australia
Sampling year	2004
Patient	- (4050226)

EF178367 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggtt tgctgaagcg cgcacagcaa gaggcgaggg gcagcgactg gtgagtacgc tgaaaacttt tgactagcgg aggctagaag gagaga

Isolates with identical sequences of region:

AY857042(#1631)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy