CESSHIV-1 database

General information on HIV-1 isolate

# 1687

Accession number	EF178381
Name	MS2004_37_083
Subtype	B
Country	Australia
Sampling year	2004
Patient	- (884351)

EF178381 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgaggg gcggcgactg gtgagtacgc caacaatttt gactagcgga ggctagaagg agaga

Isolates with identical sequences of region:

AY856983(#1602)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy