CESSHIV-1 database

General information on HIV-1 isolate

# 1689

Accession number	EF178388
Name	MS2004_37_090
Subtype	B
Country	Australia
Sampling year	2004
Patient	- (335352)

EF178388 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacagcaa gaggcgaggg gcggcgactg gtgagtacgc cataa-ttttg actagcggag gctagaagga gaga

Isolates with identical sequences of region:

AY856966(#1598)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy