CESSHIV-1 database

General information on HIV-1 isolate

# 1701

Accession number	EF178411
Name	MS2004_37_113
Subtype	B
Country	Australia
Sampling year	2004
Patient	- (8330785)

EF178411 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacagcaa gaggcgaggg gcagcgactg gtgagtacgc tgaaaatttt tgactagcga aggctagaag gagaga

Isolates with identical sequences of region:

AY857136(#1652)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy