CESSHIV-1 database

General information on HIV-1 isolate

# 1703

Accession number	EF178417
Name	MS2004_37_119
Subtype	B
Country	Australia
Sampling year	2004
Patient	- (2310435)

EF178417 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgaggg gcggcgaccg gtgagtacgc caaaattttt tgactagcgg aggctagaag gagaga

Isolates with identical sequences of region:

AY857007(#1607) EF370176(#1451)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy