CESSHIV-1 database

General information on HIV-1 isolate

# 1042

Accession number	EF420986
Name	pXJDC6441-2
Subtype	CRF07_BC
Country	China
Sampling year	2005
Patient	XJDC6441

EF420986 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cacacggcaa gaggcgagag -cggcgactgg tgagtacgcc aaatatattt gactagcgga ggctagaagg agaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy