CESSHIV-1 database

General information on HIV-1 isolate

# 1008

Accession number	EF514697
Name	PMVL 018
Subtype	B
Country	Denmark
Sampling year	2004
Patient	PMVL-018

EF514697 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacagcaa gaggcgaggg gcggcggctg gtgagtacgc caaaattttt gactagcgga ggctagaagg agaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy