CESSHIV-1 database

General information on HIV-1 isolate

# 1166

Accession number	EF514699
Name	PMVL 012
Subtype	B
Country	Denmark
Sampling year	2004
Patient	PMVL-012

EF514699 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacrgcaa gaggcgaggg gcggcgactg gtgagtacgc caataatttt gactagcgga ggctagaagg agaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy