CESSHIV-1 database

General information on HIV-1 isolate

# 1010

Accession number	EF514700
Name	PMVL 013
Subtype	B
Country	Denmark
Sampling year	2004
Patient	PMVL-013

EF514700 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgcagcg cgcgtggcaa gaggcgaggg gcggcgaacg gtgagtacgc caaa--ctttga ctagcggagg ctagaaggag aga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy