CESSHIV-1 database

General information on HIV-1 isolate

# 1013

Accession number	EF514703
Name	PMVL 039
Subtype	B
Country	Denmark
Sampling year	2004
Patient	PMVL-039

EF514703 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

tgggggggct tgttgaaggg cgagcggcaa agggcgaggg gcggcggacg tagagactac caaaaaattt tttgactagc ggaggctaga aggagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy