CESSHIV-1 database

General information on HIV-1 isolate

# 1019

Accession number	EF514709
Name	CTL 033
Subtype	B
Country	Denmark
Sampling year	2001
Patient	CTL-033

EF514709 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacagcaa gaggcgaggg gcggcgactg gtgagtacgc caagattttt gactagcgga ggctagaagg agaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy