CESSHIV-1 database

General information on HIV-1 isolate

# 1021

Accession number	EF514712
Name	CTL 043
Subtype	B
Country	Denmark
Sampling year	2001
Patient	CTL-043

EF514712 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcgcggcaa gaggcgaggg gcggcgactg gtgagtacgc caaaattttt gactagcgga ggctaggagg agaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy