CESSHIV-1 database

General information on HIV-1 isolate

# 978

Accession number	EF633445
Name	R1
Subtype	D
Country	South Africa
Sampling year	1990
Patient	R1

EF633445 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcgcggcaa gaggcgaggg gcagcgactg gtgagtacgc taaaataatt ttgactagcg gaggctaaaa ggagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy