CESSHIV-1 database

General information on HIV-1 isolate

# 993

Accession number	EF637055
Name	BREPM1026
Subtype	BF
Country	Brazil
Sampling year	2003
Patient	1026

EF637055 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcgcggcaa gaggcgaggg gcggcgactg gtgagtacgc cataa-ttttg actagcggag gctagaagga gaga

Isolates with identical sequences of region:

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy