CESSHIV-1 database

General information on HIV-1 isolate

# 1808

Accession number	EF694036
Name	VB49 clone 3
Subtype	C
Country	India
Submitted to NCBI	2007
Patient	VB49

EF694036 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cactcggcaa gaggcgagag a-ggcgactgg tgagtacgcc taattttatt tgactagcgg aggctagaag gagaga

Isolates with identical sequences of region:

EF694034(#1806)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy